Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
RETP07949 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.19■□□□□ 0.02
RETP07949 ACTG1P2-201ENST00000415776 1125 ntBASIC15.19■□□□□ 0.02
RETP07949 ACTG1P11-201ENST00000425411 1125 ntBASIC15.19■□□□□ 0.02
RETP07949 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.19■□□□□ 0.02
RETP07949 AC098935.1-201ENST00000446057 611 ntBASIC15.19■□□□□ 0.02
RETP07949 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.19■□□□□ 0.02
RETP07949 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.19■□□□□ 0.02
RETP07949 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.19■□□□□ 0.02
RETP07949 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.19■□□□□ 0.02
RETP07949 AC013355.1-201ENST00000562625 723 ntBASIC15.19■□□□□ 0.02
RETP07949 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.19■□□□□ 0.02
RETP07949 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 AC073352.2-201ENST00000609385 439 ntBASIC15.19■□□□□ 0.02
RETP07949 AL805961.1-203ENST00000641078 1258 ntBASIC15.19■□□□□ 0.02
RETP07949 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
RETP07949 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.19■□□□□ 0.02
RETP07949 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.19■□□□□ 0.02
RETP07949 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.19■□□□□ 0.02
RETP07949 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.19■□□□□ 0.02
RETP07949 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RETP07949 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
RETP07949 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RETP07949 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.19■□□□□ 0.02
RETP07949 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.19■□□□□ 0.02
RETP07949 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.18■□□□□ 0.02
RETP07949 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.18■□□□□ 0.02
RETP07949 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.18■□□□□ 0.02
RETP07949 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.18■□□□□ 0.02
RETP07949 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RETP07949 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.18■□□□□ 0.02
RETP07949 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
RETP07949 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.18■□□□□ 0.02
RETP07949 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.18■□□□□ 0.02
RETP07949 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.18■□□□□ 0.02
RETP07949 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.18■□□□□ 0.02
RETP07949 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.18■□□□□ 0.02
RETP07949 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.18■□□□□ 0.02
RETP07949 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.18■□□□□ 0.02
RETP07949 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.18■□□□□ 0.02
RETP07949 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.18■□□□□ 0.02
RETP07949 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 AL353770.1-201ENST00000614915 403 ntBASIC15.18■□□□□ 0.02
RETP07949 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RETP07949 AC022748.3-201ENST00000621828 275 ntBASIC15.18■□□□□ 0.02
RETP07949 AP001002.3-201ENST00000623482 206 ntBASIC15.18■□□□□ 0.02
RETP07949 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RETP07949 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.18■□□□□ 0.02
RETP07949 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.18■□□□□ 0.02
RETP07949 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RETP07949 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 AC105250.1-201ENST00000509378 2057 ntBASIC15.18■□□□□ 0.02
RETP07949 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
RETP07949 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.18■□□□□ 0.02
RETP07949 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RETP07949 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
RETP07949 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RETP07949 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RETP07949 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RETP07949 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RETP07949 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RETP07949 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RETP07949 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.17■□□□□ 0.02
RETP07949 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RETP07949 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RETP07949 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RETP07949 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RETP07949 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RETP07949 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms