Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 CU634019.7-201ENST00000624153 1185 ntBASIC12.16□□□□□ -0.46
HLA-DRB1P01911 FP236241.2-201ENST00000624906 1185 ntBASIC12.16□□□□□ -0.46
HLA-DRB1P01911 AL033527.5-201ENST00000641382 801 ntBASIC12.16□□□□□ -0.46
HLA-DRB1P01911 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 CICP24-201ENST00000605464 2705 ntBASIC12.16□□□□□ -0.46
HLA-DRB1P01911 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB1P01911 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 AL158070.2-201ENST00000623713 1621 ntBASIC12.15□□□□□ -0.46
HLA-DRB1P01911 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 LINC01101-201ENST00000622953 1884 ntBASIC12.15□□□□□ -0.46
HLA-DRB1P01911 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 AC005252.3-201ENST00000623855 2258 ntBASIC12.15□□□□□ -0.46
HLA-DRB1P01911 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 AC011495.1-201ENST00000498085 584 ntBASIC12.15□□□□□ -0.46
HLA-DRB1P01911 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 AP001582.1-201ENST00000525856 295 ntBASIC12.15□□□□□ -0.46
HLA-DRB1P01911 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.15□□□□□ -0.46
HLA-DRB1P01911 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms