Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AC005089.1-201ENST00000619486 2241 ntBASIC13.62□□□□□ -0.23
HLA-DQA2P01906 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AC092580.3-201ENST00000430932 139 ntBASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AC241585.1-201ENST00000433527 519 ntBASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AC015911.4-201ENST00000588022 1070 ntBASIC13.62□□□□□ -0.23
HLA-DQA2P01906 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AL590560.3-201ENST00000623350 461 ntBASIC13.62□□□□□ -0.23
HLA-DQA2P01906 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 STRCP1-201ENST00000509801 5328 ntBASIC13.62□□□□□ -0.23
HLA-DQA2P01906 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AC018529.2-202ENST00000611482 3087 ntBASIC13.62□□□□□ -0.23
HLA-DQA2P01906 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AC140479.7-201ENST00000636301 2332 ntBASIC13.62□□□□□ -0.23
HLA-DQA2P01906 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 AC007787.1-201ENST00000588095 1583 ntBASIC13.62□□□□□ -0.23
HLA-DQA2P01906 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA2P01906 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.61□□□□□ -0.23
HLA-DQA2P01906 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 AC004066.1-201ENST00000502488 802 ntBASIC13.61□□□□□ -0.23
HLA-DQA2P01906 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
HLA-DQA2P01906 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms