Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALDH1A1P00352 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 OR2R1P-201ENST00000441404 914 ntBASIC16.87■□□□□ 0.29
ALDH1A1P00352 AC018638.5-201ENST00000450885 754 ntBASIC16.87■□□□□ 0.29
ALDH1A1P00352 RPL18AP8-201ENST00000486071 528 ntBASIC16.87■□□□□ 0.29
ALDH1A1P00352 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 AC007952.4-201ENST00000573866 637 ntBASIC16.87■□□□□ 0.29
ALDH1A1P00352 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 AC006548.2-201ENST00000605217 529 ntBASIC16.87■□□□□ 0.29
ALDH1A1P00352 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 TEKT4P2-202ENST00000559466 1312 ntBASIC16.87■□□□□ 0.29
ALDH1A1P00352 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ALDH1A1P00352 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 AGGF1P2-201ENST00000426656 2106 ntBASIC16.87■□□□□ 0.29
ALDH1A1P00352 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALDH1A1P00352 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.86■□□□□ 0.29
ALDH1A1P00352 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.86■□□□□ 0.29
ALDH1A1P00352 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ALDH1A1P00352 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 AL357373.1-201ENST00000394974 322 ntBASIC16.86■□□□□ 0.29
ALDH1A1P00352 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.86■□□□□ 0.29
ALDH1A1P00352 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.86■□□□□ 0.29
ALDH1A1P00352 RN7SL494P-201ENST00000461517 304 ntBASIC16.86■□□□□ 0.29
ALDH1A1P00352 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.86■□□□□ 0.29
ALDH1A1P00352 OR5BD1P-201ENST00000532527 817 ntBASIC16.86■□□□□ 0.29
ALDH1A1P00352 RN7SL357P-201ENST00000581065 298 ntBASIC16.86■□□□□ 0.29
ALDH1A1P00352 MME-218ENST00000625667 363 ntTSL 5 BASIC16.86■□□□□ 0.29
ALDH1A1P00352 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.86■□□□□ 0.29
ALDH1A1P00352 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.86■□□□□ 0.29
ALDH1A1P00352 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.86■□□□□ 0.29
ALDH1A1P00352 AC092127.1-201ENST00000567093 3455 ntBASIC16.86■□□□□ 0.29
ALDH1A1P00352 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ALDH1A1P00352 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 CICP11-201ENST00000434745 2827 ntBASIC16.85■□□□□ 0.29
ALDH1A1P00352 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.85■□□□□ 0.29
ALDH1A1P00352 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 OR51A9P-201ENST00000422578 911 ntBASIC16.85■□□□□ 0.29
ALDH1A1P00352 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.85■□□□□ 0.29
ALDH1A1P00352 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALDH1A1P00352 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms