Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.35□□□□□ -0.27
KDM4BO94953 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.35□□□□□ -0.27
KDM4BO94953 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.35□□□□□ -0.27
KDM4BO94953 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.35□□□□□ -0.27
KDM4BO94953 RPSAP43-201ENST00000402237 625 ntBASIC13.35□□□□□ -0.27
KDM4BO94953 BX842568.4-201ENST00000421222 227 ntBASIC13.35□□□□□ -0.27
KDM4BO94953 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.35□□□□□ -0.27
KDM4BO94953 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.35□□□□□ -0.27
KDM4BO94953 AC023141.5-201ENST00000458585 616 ntBASIC13.35□□□□□ -0.27
KDM4BO94953 AC112482.1-201ENST00000492080 688 ntBASIC13.35□□□□□ -0.27
KDM4BO94953 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.35□□□□□ -0.27
KDM4BO94953 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
KDM4BO94953 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.35□□□□□ -0.27
KDM4BO94953 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.35□□□□□ -0.27
KDM4BO94953 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.35□□□□□ -0.27
KDM4BO94953 AP000845.1-201ENST00000581677 2131 ntBASIC13.35□□□□□ -0.27
KDM4BO94953 AC010327.4-202ENST00000591484 748 ntBASIC13.35□□□□□ -0.27
KDM4BO94953 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.35□□□□□ -0.27
KDM4BO94953 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
KDM4BO94953 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
KDM4BO94953 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.35□□□□□ -0.27
KDM4BO94953 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
KDM4BO94953 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
KDM4BO94953 BEND3P1-201ENST00000421591 1944 ntBASIC13.35□□□□□ -0.27
KDM4BO94953 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.35□□□□□ -0.27
KDM4BO94953 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KDM4BO94953 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
KDM4BO94953 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
KDM4BO94953 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.34□□□□□ -0.27
KDM4BO94953 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
KDM4BO94953 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.34□□□□□ -0.27
KDM4BO94953 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
KDM4BO94953 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.34□□□□□ -0.27
KDM4BO94953 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.34□□□□□ -0.27
KDM4BO94953 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
KDM4BO94953 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
KDM4BO94953 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
KDM4BO94953 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
KDM4BO94953 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
KDM4BO94953 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
KDM4BO94953 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.34□□□□□ -0.27
KDM4BO94953 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.34□□□□□ -0.27
KDM4BO94953 UPF3AP3-201ENST00000420996 769 ntBASIC13.34□□□□□ -0.27
KDM4BO94953 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.34□□□□□ -0.27
KDM4BO94953 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.34□□□□□ -0.27
KDM4BO94953 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
KDM4BO94953 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.34□□□□□ -0.27
KDM4BO94953 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 AP001267.2-201ENST00000532619 2086 ntBASIC13.34□□□□□ -0.27
KDM4BO94953 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KDM4BO94953 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
KDM4BO94953 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms