Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.18□□□□□ -0.14
HCN1O60741 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HCN1O60741 WASH3P-207ENST00000560956 1394 ntBASIC14.18□□□□□ -0.14
HCN1O60741 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCN1O60741 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HCN1O60741 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCN1O60741 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.18□□□□□ -0.14
HCN1O60741 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.18□□□□□ -0.14
HCN1O60741 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCN1O60741 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCN1O60741 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HCN1O60741 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HCN1O60741 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCN1O60741 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.18□□□□□ -0.14
HCN1O60741 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.18□□□□□ -0.14
HCN1O60741 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCN1O60741 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.18□□□□□ -0.14
HCN1O60741 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCN1O60741 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 AC084364.1-201ENST00000551967 1556 ntBASIC14.17□□□□□ -0.14
HCN1O60741 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.17□□□□□ -0.14
HCN1O60741 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.17□□□□□ -0.14
HCN1O60741 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
HCN1O60741 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.17□□□□□ -0.14
HCN1O60741 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
HCN1O60741 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.17□□□□□ -0.14
HCN1O60741 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.17□□□□□ -0.14
HCN1O60741 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HCN1O60741 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 AC134915.1-201ENST00000426461 574 ntBASIC14.17□□□□□ -0.14
HCN1O60741 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.17□□□□□ -0.14
HCN1O60741 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.17□□□□□ -0.14
HCN1O60741 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.17□□□□□ -0.14
HCN1O60741 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.17□□□□□ -0.14
HCN1O60741 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.17□□□□□ -0.14
HCN1O60741 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.17□□□□□ -0.14
HCN1O60741 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.17□□□□□ -0.14
HCN1O60741 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HCN1O60741 AC000095.1-201ENST00000603208 874 ntBASIC14.17□□□□□ -0.14
HCN1O60741 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.17□□□□□ -0.14
HCN1O60741 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
HCN1O60741 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.17□□□□□ -0.14
HCN1O60741 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.17□□□□□ -0.14
HCN1O60741 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.17□□□□□ -0.14
HCN1O60741 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCN1O60741 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.16□□□□□ -0.14
HCN1O60741 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
HCN1O60741 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 CICP14-201ENST00000629111 2732 ntBASIC14.16□□□□□ -0.14
HCN1O60741 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.16□□□□□ -0.14
HCN1O60741 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.16□□□□□ -0.14
HCN1O60741 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
HCN1O60741 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HCN1O60741 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.16□□□□□ -0.14
HCN1O60741 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.16□□□□□ -0.14
HCN1O60741 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.16□□□□□ -0.14
HCN1O60741 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.16□□□□□ -0.14
HCN1O60741 KRT17P8-201ENST00000540749 863 ntBASIC14.16□□□□□ -0.14
HCN1O60741 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.16□□□□□ -0.14
HCN1O60741 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.16□□□□□ -0.14
HCN1O60741 AL008721.1-201ENST00000609964 604 ntBASIC14.16□□□□□ -0.14
HCN1O60741 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.16□□□□□ -0.14
HCN1O60741 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCN1O60741 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms