Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LCMT2O60294 CLUHP2-201ENST00000426660 1303 ntBASIC14.41□□□□□ -0.1
LCMT2O60294 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LCMT2O60294 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.41□□□□□ -0.1
LCMT2O60294 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.41□□□□□ -0.1
LCMT2O60294 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LCMT2O60294 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
LCMT2O60294 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.41□□□□□ -0.1
LCMT2O60294 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
LCMT2O60294 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.41□□□□□ -0.1
LCMT2O60294 CNN2P8-201ENST00000421872 913 ntBASIC14.41□□□□□ -0.1
LCMT2O60294 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.41□□□□□ -0.1
LCMT2O60294 FAM197Y7-201ENST00000432892 766 ntBASIC14.41□□□□□ -0.1
LCMT2O60294 C2orf27AP3-201ENST00000434123 579 ntBASIC14.41□□□□□ -0.1
LCMT2O60294 AC245100.3-201ENST00000441281 285 ntBASIC14.41□□□□□ -0.1
LCMT2O60294 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.41□□□□□ -0.1
LCMT2O60294 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.41□□□□□ -0.1
LCMT2O60294 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LCMT2O60294 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.41□□□□□ -0.1
LCMT2O60294 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.41□□□□□ -0.1
LCMT2O60294 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LCMT2O60294 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LCMT2O60294 AL354718.3-201ENST00000616414 581 ntBASIC14.41□□□□□ -0.1
LCMT2O60294 CR382287.1-201ENST00000623954 586 ntBASIC14.41□□□□□ -0.1
LCMT2O60294 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LCMT2O60294 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.41□□□□□ -0.1
LCMT2O60294 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.41□□□□□ -0.1
LCMT2O60294 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LCMT2O60294 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCMT2O60294 PDIA3P1-201ENST00000471856 1510 ntBASIC14.41□□□□□ -0.1
LCMT2O60294 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.4□□□□□ -0.1
LCMT2O60294 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LCMT2O60294 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 MTHFR-210ENST00000641407 2387 ntBASIC14.4□□□□□ -0.1
LCMT2O60294 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.4□□□□□ -0.1
LCMT2O60294 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.4□□□□□ -0.1
LCMT2O60294 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LCMT2O60294 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.4□□□□□ -0.1
LCMT2O60294 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LCMT2O60294 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 TPM3P8-201ENST00000330554 643 ntBASIC14.4□□□□□ -0.1
LCMT2O60294 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.4□□□□□ -0.1
LCMT2O60294 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LCMT2O60294 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.4□□□□□ -0.1
LCMT2O60294 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 KRT43P-201ENST00000434019 910 ntBASIC14.4□□□□□ -0.1
LCMT2O60294 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.4□□□□□ -0.1
LCMT2O60294 AL590640.2-201ENST00000457038 527 ntBASIC14.4□□□□□ -0.1
LCMT2O60294 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LCMT2O60294 RNA5SP486-201ENST00000515961 83 ntBASIC14.4□□□□□ -0.1
LCMT2O60294 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.4□□□□□ -0.1
LCMT2O60294 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.4□□□□□ -0.1
LCMT2O60294 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.4□□□□□ -0.1
LCMT2O60294 AC078819.1-201ENST00000547454 765 ntBASIC14.4□□□□□ -0.1
LCMT2O60294 AC012085.1-201ENST00000548270 765 ntBASIC14.4□□□□□ -0.1
LCMT2O60294 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.4□□□□□ -0.1
LCMT2O60294 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.4□□□□□ -0.1
LCMT2O60294 RAB43P1-201ENST00000561790 589 ntBASIC14.4□□□□□ -0.1
LCMT2O60294 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.4□□□□□ -0.1
LCMT2O60294 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LCMT2O60294 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.4□□□□□ -0.1
LCMT2O60294 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LCMT2O60294 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.4□□□□□ -0.1
LCMT2O60294 ECM1P1-201ENST00000604092 1279 ntBASIC14.4□□□□□ -0.1
LCMT2O60294 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.4□□□□□ -0.1
LCMT2O60294 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCMT2O60294 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms