Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IDH3BO43837 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
IDH3BO43837 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.97□□□□□ -0.17
IDH3BO43837 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
IDH3BO43837 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IDH3BO43837 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
IDH3BO43837 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
IDH3BO43837 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
IDH3BO43837 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
IDH3BO43837 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.97□□□□□ -0.17
IDH3BO43837 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
IDH3BO43837 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
IDH3BO43837 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.97□□□□□ -0.17
IDH3BO43837 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.97□□□□□ -0.17
IDH3BO43837 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
IDH3BO43837 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
IDH3BO43837 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.96□□□□□ -0.17
IDH3BO43837 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
IDH3BO43837 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 AC131902.2-201ENST00000566892 2172 ntBASIC13.96□□□□□ -0.17
IDH3BO43837 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.96□□□□□ -0.17
IDH3BO43837 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.96□□□□□ -0.17
IDH3BO43837 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
IDH3BO43837 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.96□□□□□ -0.17
IDH3BO43837 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
IDH3BO43837 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
IDH3BO43837 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.96□□□□□ -0.17
IDH3BO43837 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.96□□□□□ -0.17
IDH3BO43837 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.96□□□□□ -0.17
IDH3BO43837 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.96□□□□□ -0.17
IDH3BO43837 AL512356.2-201ENST00000546955 174 ntBASIC13.96□□□□□ -0.17
IDH3BO43837 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
IDH3BO43837 MIR4453-201ENST00000584019 89 ntBASIC13.96□□□□□ -0.17
IDH3BO43837 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.96□□□□□ -0.17
IDH3BO43837 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.96□□□□□ -0.17
IDH3BO43837 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
IDH3BO43837 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.96□□□□□ -0.17
IDH3BO43837 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IDH3BO43837 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.96□□□□□ -0.18
IDH3BO43837 CETN4P-206ENST00000642099 2168 ntBASIC13.96□□□□□ -0.18
IDH3BO43837 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.96□□□□□ -0.18
IDH3BO43837 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
IDH3BO43837 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
IDH3BO43837 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.18
IDH3BO43837 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.96□□□□□ -0.18
IDH3BO43837 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.96□□□□□ -0.18
IDH3BO43837 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IDH3BO43837 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
IDH3BO43837 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
IDH3BO43837 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IDH3BO43837 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IDH3BO43837 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.96□□□□□ -0.18
IDH3BO43837 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.96□□□□□ -0.18
IDH3BO43837 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
IDH3BO43837 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.95□□□□□ -0.18
IDH3BO43837 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
IDH3BO43837 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.95□□□□□ -0.18
IDH3BO43837 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IDH3BO43837 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.95□□□□□ -0.18
IDH3BO43837 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
IDH3BO43837 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IDH3BO43837 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
IDH3BO43837 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.95□□□□□ -0.18
IDH3BO43837 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IDH3BO43837 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
IDH3BO43837 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
IDH3BO43837 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.95□□□□□ -0.18
IDH3BO43837 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IDH3BO43837 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IDH3BO43837 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.95□□□□□ -0.18
IDH3BO43837 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
IDH3BO43837 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.95□□□□□ -0.18
IDH3BO43837 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IDH3BO43837 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.95□□□□□ -0.18
IDH3BO43837 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.95□□□□□ -0.18
IDH3BO43837 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IDH3BO43837 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IDH3BO43837 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IDH3BO43837 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.95□□□□□ -0.18
IDH3BO43837 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms