Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMAD6O43541 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.15■□□□□ 0.02
SMAD6O43541 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.15■□□□□ 0.02
SMAD6O43541 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 LINC01101-201ENST00000622953 1884 ntBASIC15.15■□□□□ 0.02
SMAD6O43541 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SMAD6O43541 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.15■□□□□ 0.02
SMAD6O43541 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.15■□□□□ 0.02
SMAD6O43541 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SMAD6O43541 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
SMAD6O43541 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 AC079178.1-201ENST00000420915 656 ntBASIC15.15■□□□□ 0.02
SMAD6O43541 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.15■□□□□ 0.02
SMAD6O43541 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SMAD6O43541 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.15■□□□□ 0.02
SMAD6O43541 HSPB1P2-201ENST00000448722 546 ntBASIC15.15■□□□□ 0.02
SMAD6O43541 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SMAD6O43541 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.15■□□□□ 0.02
SMAD6O43541 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.15■□□□□ 0.02
SMAD6O43541 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
SMAD6O43541 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SMAD6O43541 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.15■□□□□ 0.02
SMAD6O43541 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.15■□□□□ 0.02
SMAD6O43541 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMAD6O43541 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SMAD6O43541 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 AC013726.1-201ENST00000563747 2285 ntBASIC15.14■□□□□ 0.01
SMAD6O43541 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SMAD6O43541 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 FER1L4-210ENST00000615531 5998 ntBASIC15.14■□□□□ 0.01
SMAD6O43541 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.14■□□□□ 0.01
SMAD6O43541 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.14■□□□□ 0.01
SMAD6O43541 AC068587.6-202ENST00000641839 5619 ntBASIC15.14■□□□□ 0.01
SMAD6O43541 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.14■□□□□ 0.01
SMAD6O43541 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.14■□□□□ 0.01
SMAD6O43541 TLE1P1-201ENST00000422965 589 ntBASIC15.14■□□□□ 0.01
SMAD6O43541 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.14■□□□□ 0.01
SMAD6O43541 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SMAD6O43541 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 PFN1P12-201ENST00000455938 534 ntBASIC15.14■□□□□ 0.01
SMAD6O43541 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.14■□□□□ 0.01
SMAD6O43541 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SMAD6O43541 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.14■□□□□ 0.01
SMAD6O43541 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.14■□□□□ 0.01
SMAD6O43541 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.14■□□□□ 0.01
SMAD6O43541 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.14■□□□□ 0.01
SMAD6O43541 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.14■□□□□ 0.01
SMAD6O43541 MIR4525-201ENST00000580000 75 ntBASIC15.14■□□□□ 0.01
SMAD6O43541 AC104982.3-201ENST00000581995 514 ntBASIC15.14■□□□□ 0.01
SMAD6O43541 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.14■□□□□ 0.01
SMAD6O43541 AL118558.3-201ENST00000607414 1079 ntBASIC15.14■□□□□ 0.01
SMAD6O43541 GPR182-203ENST00000622922 591 ntBASIC15.14■□□□□ 0.01
SMAD6O43541 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.14■□□□□ 0.01
SMAD6O43541 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.14■□□□□ 0.01
SMAD6O43541 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.14■□□□□ 0.01
SMAD6O43541 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.14■□□□□ 0.01
SMAD6O43541 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SMAD6O43541 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SMAD6O43541 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMAD6O43541 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms