Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXN1O15353 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXN1O15353 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.93■□□□□ 0.46
FOXN1O15353 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXN1O15353 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXN1O15353 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXN1O15353 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.93■□□□□ 0.46
FOXN1O15353 AC104073.2-201ENST00000453737 312 ntBASIC17.93■□□□□ 0.46
FOXN1O15353 RNMTL1P1-201ENST00000454103 560 ntBASIC17.93■□□□□ 0.46
FOXN1O15353 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.93■□□□□ 0.46
FOXN1O15353 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.93■□□□□ 0.46
FOXN1O15353 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
FOXN1O15353 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
FOXN1O15353 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXN1O15353 MME-218ENST00000625667 363 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXN1O15353 AC023157.3-201ENST00000619086 2088 ntBASIC17.93■□□□□ 0.46
FOXN1O15353 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
FOXN1O15353 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
FOXN1O15353 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.93■□□□□ 0.46
FOXN1O15353 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN1O15353 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
FOXN1O15353 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 AL357373.1-201ENST00000394974 322 ntBASIC17.92■□□□□ 0.46
FOXN1O15353 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXN1O15353 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.92■□□□□ 0.46
FOXN1O15353 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.92■□□□□ 0.46
FOXN1O15353 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.92■□□□□ 0.46
FOXN1O15353 AC243562.2-201ENST00000561247 970 ntBASIC17.92■□□□□ 0.46
FOXN1O15353 AL031713.1-201ENST00000564813 661 ntBASIC17.92■□□□□ 0.46
FOXN1O15353 MIR4754-201ENST00000582477 89 ntBASIC17.92■□□□□ 0.46
FOXN1O15353 BNIP3P13-201ENST00000599968 566 ntBASIC17.92■□□□□ 0.46
FOXN1O15353 AC138894.2-201ENST00000602838 371 ntBASIC17.92■□□□□ 0.46
FOXN1O15353 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.92■□□□□ 0.46
FOXN1O15353 AL161773.1-201ENST00000624845 863 ntBASIC17.92■□□□□ 0.46
FOXN1O15353 AC004923.1-202ENST00000642106 209 ntBASIC17.92■□□□□ 0.46
FOXN1O15353 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXN1O15353 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.92■□□□□ 0.46
FOXN1O15353 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXN1O15353 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
FOXN1O15353 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXN1O15353 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
FOXN1O15353 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXN1O15353 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
FOXN1O15353 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
FOXN1O15353 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN1O15353 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN1O15353 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 LINC02228-204ENST00000642115 2962 ntBASIC17.91■□□□□ 0.46
FOXN1O15353 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
FOXN1O15353 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN1O15353 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 BRI3P1-201ENST00000440440 378 ntBASIC17.91■□□□□ 0.46
FOXN1O15353 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.91■□□□□ 0.46
FOXN1O15353 MARK2P5-201ENST00000507649 634 ntBASIC17.91■□□□□ 0.46
FOXN1O15353 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
FOXN1O15353 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXN1O15353 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXN1O15353 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
FOXN1O15353 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXN1O15353 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXN1O15353 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms