Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CHD1O14646 AL008638.4-201ENST00000624792 1315 ntBASIC23.36■■□□□ 1.33
CHD1O14646 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD1O14646 LINP1-201ENST00000417112 917 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD1O14646 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC23.36■■□□□ 1.33
CHD1O14646 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CHD1O14646 AC010503.4-201ENST00000615487 688 ntBASIC23.36■■□□□ 1.33
CHD1O14646 AC126755.5-201ENST00000622756 267 ntBASIC23.36■■□□□ 1.33
CHD1O14646 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 AC139712.1-201ENST00000378256 1875 ntBASIC23.36■■□□□ 1.33
CHD1O14646 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD1O14646 AC092135.3-201ENST00000624151 1846 ntBASIC23.36■■□□□ 1.33
CHD1O14646 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CHD1O14646 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC23.36■■□□□ 1.33
CHD1O14646 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD1O14646 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC23.36■■□□□ 1.33
CHD1O14646 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHD1O14646 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC23.36■■□□□ 1.33
CHD1O14646 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD1O14646 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD1O14646 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CHD1O14646 RN7SKP155-201ENST00000516031 288 ntBASIC23.36■■□□□ 1.33
CHD1O14646 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD1O14646 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC23.36■■□□□ 1.33
CHD1O14646 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC23.36■■□□□ 1.33
CHD1O14646 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHD1O14646 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHD1O14646 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC23.35■■□□□ 1.33
CHD1O14646 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHD1O14646 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC23.35■■□□□ 1.33
CHD1O14646 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC23.35■■□□□ 1.33
CHD1O14646 RN7SL375P-201ENST00000492442 298 ntBASIC23.35■■□□□ 1.33
CHD1O14646 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC23.35■■□□□ 1.33
CHD1O14646 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC23.35■■□□□ 1.33
CHD1O14646 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC23.35■■□□□ 1.33
CHD1O14646 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD1O14646 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC23.35■■□□□ 1.33
CHD1O14646 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC23.35■■□□□ 1.33
CHD1O14646 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD1O14646 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC23.35■■□□□ 1.33
CHD1O14646 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD1O14646 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD1O14646 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD1O14646 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHD1O14646 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHD1O14646 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
CHD1O14646 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD1O14646 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD1O14646 BLK-205ENST00000529894 2017 ntTSL 5 BASIC23.34■■□□□ 1.33
CHD1O14646 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHD1O14646 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD1O14646 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC23.34■■□□□ 1.33
CHD1O14646 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD1O14646 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD1O14646 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD1O14646 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC23.34■■□□□ 1.33
CHD1O14646 AP003040.1-201ENST00000532044 1024 ntBASIC23.34■■□□□ 1.33
CHD1O14646 RN7SL440P-201ENST00000577855 343 ntBASIC23.34■■□□□ 1.33
CHD1O14646 AC016582.2-202ENST00000587765 1094 ntBASIC23.34■■□□□ 1.33
CHD1O14646 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC23.34■■□□□ 1.33
CHD1O14646 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC23.34■■□□□ 1.33
CHD1O14646 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC23.34■■□□□ 1.33
CHD1O14646 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD1O14646 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CHD1O14646 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD1O14646 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD1O14646 AC020931.1-201ENST00000589622 1346 ntBASIC23.34■■□□□ 1.33
CHD1O14646 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD1O14646 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CHD1O14646 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC23.33■■□□□ 1.33
CHD1O14646 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CHD1O14646 HNRNPA1P21-201ENST00000424115 961 ntBASIC23.33■■□□□ 1.33
CHD1O14646 RN7SL351P-201ENST00000469306 248 ntBASIC23.33■■□□□ 1.33
CHD1O14646 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC23.33■■□□□ 1.33
CHD1O14646 EEF1DP7-201ENST00000580496 513 ntBASIC23.33■■□□□ 1.33
CHD1O14646 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CHD1O14646 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC23.33■■□□□ 1.33
CHD1O14646 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC23.33■■□□□ 1.33
CHD1O14646 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC23.33■■□□□ 1.33
CHD1O14646 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
CHD1O14646 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHD1O14646 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHD1O14646 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CHD1O14646 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CHD1O14646 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHD1O14646 CICP13-201ENST00000422015 2789 ntBASIC23.33■■□□□ 1.33
CHD1O14646 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHD1O14646 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CHD1O14646 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms