Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 AL049840.3-201ENST00000602669 611 ntBASIC11.08□□□□□ -0.64
SMKR1H3BMG3 AC026979.3-201ENST00000607315 403 ntBASIC11.08□□□□□ -0.64
SMKR1H3BMG3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 AL031008.1-201ENST00000619963 541 ntBASIC11.08□□□□□ -0.64
SMKR1H3BMG3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 AC016397.2-201ENST00000624848 1985 ntBASIC11.08□□□□□ -0.64
SMKR1H3BMG3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMKR1H3BMG3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 AC012617.1-204ENST00000586340 2305 ntBASIC11.07□□□□□ -0.64
SMKR1H3BMG3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 FAM220BP-201ENST00000377689 816 ntBASIC11.07□□□□□ -0.64
SMKR1H3BMG3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 AC142381.1-201ENST00000426099 345 ntBASIC11.07□□□□□ -0.64
SMKR1H3BMG3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 KRT19P2-202ENST00000557173 1012 ntBASIC11.07□□□□□ -0.64
SMKR1H3BMG3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 RARRES2P8-201ENST00000566335 367 ntBASIC11.07□□□□□ -0.64
SMKR1H3BMG3 AC068137.2-201ENST00000605408 478 ntBASIC11.07□□□□□ -0.64
SMKR1H3BMG3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SMKR1H3BMG3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms