Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 LBH-202ENST00000401506 485 ntTSL 3 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 HLA-DQB2-229ENST00000411527 1059 ntBASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 HNRNPA1P27-201ENST00000412087 955 ntBASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 AC073150.1-201ENST00000450406 1084 ntBASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 AL353770.1-201ENST00000614915 403 ntBASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 DDX5-235ENST00000630471 473 ntTSL 4 BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 FAS-202ENST00000352159 1722 ntTSL 5 BASIC21.33■■□□□ 1
CCDC144AA2RUR9 AC018629.1-201ENST00000623381 1736 ntBASIC21.33■■□□□ 1
CCDC144AA2RUR9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC144AA2RUR9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCDC144AA2RUR9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC144AA2RUR9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCDC144AA2RUR9 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 R3HDM2P2-201ENST00000401880 2116 ntBASIC21.32■■□□□ 1
CCDC144AA2RUR9 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 AC091046.1-201ENST00000331871 207 ntBASIC21.32■■□□□ 1
CCDC144AA2RUR9 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 TMEM198B-204ENST00000484016 896 ntBASIC21.32■■□□□ 1
CCDC144AA2RUR9 MIR4722-201ENST00000578292 60 ntBASIC21.32■■□□□ 1
CCDC144AA2RUR9 MIR4706-201ENST00000582134 82 ntBASIC21.32■■□□□ 1
CCDC144AA2RUR9 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CCDC144AA2RUR9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC144AA2RUR9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 AL353637.1-201ENST00000451571 732 ntBASIC21.31■■□□□ 1
CCDC144AA2RUR9 MPRIPP1-201ENST00000452433 1089 ntBASIC21.31■■□□□ 1
CCDC144AA2RUR9 AC242376.1-201ENST00000559033 726 ntBASIC21.31■■□□□ 1
CCDC144AA2RUR9 MIR3907-201ENST00000579424 151 ntBASIC21.31■■□□□ 1
CCDC144AA2RUR9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 AL133499.1-201ENST00000596207 608 ntBASIC21.31■■□□□ 1
CCDC144AA2RUR9 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC144AA2RUR9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC21.31■■□□□ 1
CCDC144AA2RUR9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms