Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 AC244669.2-201ENST00000612320 853 ntBASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPDC1A2A3K4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AC007191.1-201ENST00000623179 2995 ntBASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 REXO1L6P-201ENST00000603433 1515 ntBASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AC099336.1-201ENST00000417053 1171 ntBASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPDC1A2A3K4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PTPDC1A2A3K4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms