Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 KRT18P64-201ENST00000434946 1219 ntBASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 HLA-V-204ENST00000476601 1289 ntBASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 TSEN15P1-201ENST00000423257 515 ntBASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 CNN2P2-201ENST00000443536 909 ntBASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 DNAJB3-202ENST00000449667 1266 ntBASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 CNN2P3-201ENST00000450201 906 ntBASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 AC109322.1-201ENST00000524499 1264 ntBASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 AL136317.3-201ENST00000618497 906 ntBASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF103-CHMP3A0A140T963 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF103-CHMP3A0A140T963 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms