Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 AC016397.2-201ENST00000624848 1985 ntBASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 KRT8P22-201ENST00000562317 1415 ntBASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 UNC93B7-201ENST00000509439 705 ntBASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 AC015910.1-201ENST00000579400 975 ntBASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 AC012313.10-201ENST00000623509 926 ntBASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 AL645728.2-202ENST00000641679 227 ntBASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
RCL1Q9Y2P8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RCL1Q9Y2P8 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 AC074386.1-202ENST00000463561 864 ntBASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 PDPK2P-202ENST00000562415 1191 ntBASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 AC116407.3-201ENST00000623905 1129 ntBASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 AL354702.1-201ENST00000442006 1960 ntBASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 AL731571.1-201ENST00000617058 5428 ntBASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RCL1Q9Y2P8 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RCL1Q9Y2P8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms