Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC20.39■□□□□ 0.85
NINLQ9Y2I6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 KRTAP19-9P-201ENST00000421795 191 ntBASIC20.38■□□□□ 0.85
NINLQ9Y2I6 SPTLC1P5-201ENST00000450718 252 ntBASIC20.38■□□□□ 0.85
NINLQ9Y2I6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 AC009884.2-201ENST00000603110 324 ntBASIC20.38■□□□□ 0.85
NINLQ9Y2I6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.38■□□□□ 0.85
NINLQ9Y2I6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 AL596257.1-201ENST00000641463 2694 ntBASIC20.37■□□□□ 0.85
NINLQ9Y2I6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 AC078875.1-201ENST00000431907 724 ntBASIC20.37■□□□□ 0.85
NINLQ9Y2I6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 RPL18P13-201ENST00000478088 569 ntBASIC20.37■□□□□ 0.85
NINLQ9Y2I6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 AL160314.3-201ENST00000556041 767 ntBASIC20.37■□□□□ 0.85
NINLQ9Y2I6 SNORD3B-2-202ENST00000571722 791 ntBASIC20.37■□□□□ 0.85
NINLQ9Y2I6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 AC027601.3-201ENST00000622907 509 ntBASIC20.37■□□□□ 0.85
NINLQ9Y2I6 MVK-217ENST00000639206 367 ntTSL 5 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NINLQ9Y2I6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NINLQ9Y2I6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms