Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC21.83■■□□□ 1.09
SHANK2Q9UPX8 AC006504.5-208ENST00000588784 2401 ntBASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 MIR6842-201ENST00000612539 65 ntBASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 AC009560.1-201ENST00000620208 434 ntBASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 AC025262.2-201ENST00000623975 1056 ntBASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 AC005618.3-201ENST00000624928 458 ntBASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SHANK2Q9UPX8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 AGAP7P-201ENST00000582299 2062 ntBASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 AGAP14-201ENST00000624701 2060 ntBASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 AC091951.1-201ENST00000512854 2465 ntBASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 AL512306.1-201ENST00000432698 848 ntBASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 AP002803.1-201ENST00000528836 498 ntBASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHANK2Q9UPX8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 MARK2P16-201ENST00000605714 1723 ntBASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 LINC00528-201ENST00000600723 2160 ntBASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 AP000356.3-201ENST00000382243 753 ntBASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 CICP6-201ENST00000457191 2729 ntBASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC21.81■■□□□ 1.08
SHANK2Q9UPX8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 AC013268.4-201ENST00000637413 2228 ntBASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 AL807761.2-201ENST00000422849 729 ntBASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms