Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 INTS4P1-203ENST00000641008 3683 ntBASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 AC016694.1-201ENST00000434179 700 ntBASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 AC007551.1-201ENST00000457394 519 ntBASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 FTLP10-202ENST00000505798 471 ntBASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 RNA5SP486-201ENST00000515961 83 ntBASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 AC078819.1-201ENST00000547454 765 ntBASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 AC012085.1-201ENST00000548270 765 ntBASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 FKBP4P6-201ENST00000457486 1332 ntBASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 AL009178.2-201ENST00000597278 2719 ntBASIC16.69■□□□□ 0.26
BLOC1S4Q9NUP1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 BX640514.1-201ENST00000583223 1918 ntBASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 KRT17P7-201ENST00000451704 1104 ntBASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 GCOM2-201ENST00000509133 1104 ntBASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 AP000593.2-201ENST00000542775 1433 ntBASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BLOC1S4Q9NUP1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 AC026748.1-201ENST00000624349 3251 ntBASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 FER1L4-210ENST00000615531 5998 ntBASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms