Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 AC106820.3-201ENST00000561653 397 ntBASIC15.63■□□□□ 0.09
HPS4Q9NQG7 AC004466.1-201ENST00000599515 1080 ntBASIC15.63■□□□□ 0.09
HPS4Q9NQG7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 LINC02228-204ENST00000642115 2962 ntBASIC15.63■□□□□ 0.09
HPS4Q9NQG7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.63■□□□□ 0.09
HPS4Q9NQG7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 AC104457.1-201ENST00000401024 814 ntBASIC15.62■□□□□ 0.09
HPS4Q9NQG7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 HIST2H2BB-201ENST00000449108 381 ntBASIC15.62■□□□□ 0.09
HPS4Q9NQG7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 ZACNP1-201ENST00000612259 710 ntBASIC15.62■□□□□ 0.09
HPS4Q9NQG7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 KRT8P4-201ENST00000509735 1454 ntBASIC15.62■□□□□ 0.09
HPS4Q9NQG7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 AC006058.4-201ENST00000624016 1670 ntBASIC15.62■□□□□ 0.09
HPS4Q9NQG7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS4Q9NQG7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 AP005117.1-202ENST00000581724 1908 ntBASIC15.61■□□□□ 0.09
HPS4Q9NQG7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 CHMP1AP1-201ENST00000445563 662 ntBASIC15.61■□□□□ 0.09
HPS4Q9NQG7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 AC005730.2-201ENST00000564549 1184 ntBASIC15.61■□□□□ 0.09
HPS4Q9NQG7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HPS4Q9NQG7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms