Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.96□□□□□ -0.01
SSU72Q9NP77 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.96□□□□□ -0.01
SSU72Q9NP77 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSU72Q9NP77 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSU72Q9NP77 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
SSU72Q9NP77 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.96□□□□□ -0.02
SSU72Q9NP77 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
SSU72Q9NP77 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSU72Q9NP77 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SSU72Q9NP77 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.96□□□□□ -0.02
SSU72Q9NP77 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 CICP16-201ENST00000502609 2813 ntBASIC14.95□□□□□ -0.02
SSU72Q9NP77 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 AC027612.1-201ENST00000445234 2395 ntBASIC14.95□□□□□ -0.02
SSU72Q9NP77 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 AC004461.1-201ENST00000412461 403 ntBASIC14.95□□□□□ -0.02
SSU72Q9NP77 SPDYE7P-202ENST00000420373 878 ntBASIC14.95□□□□□ -0.02
SSU72Q9NP77 TPM4P1-201ENST00000436100 807 ntBASIC14.95□□□□□ -0.02
SSU72Q9NP77 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 ALG1L5P-201ENST00000482043 771 ntBASIC14.95□□□□□ -0.02
SSU72Q9NP77 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 AL512361.1-201ENST00000554200 418 ntBASIC14.95□□□□□ -0.02
SSU72Q9NP77 AC010336.2-201ENST00000564226 506 ntBASIC14.95□□□□□ -0.02
SSU72Q9NP77 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.95□□□□□ -0.02
SSU72Q9NP77 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSU72Q9NP77 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SSU72Q9NP77 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SSU72Q9NP77 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.94□□□□□ -0.02
SSU72Q9NP77 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.94□□□□□ -0.02
SSU72Q9NP77 SBF1P1-201ENST00000444527 5631 ntBASIC14.94□□□□□ -0.02
SSU72Q9NP77 AC015909.5-201ENST00000624336 2266 ntBASIC14.94□□□□□ -0.02
SSU72Q9NP77 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SSU72Q9NP77 AC090643.2-201ENST00000623442 2029 ntBASIC14.94□□□□□ -0.02
SSU72Q9NP77 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
SSU72Q9NP77 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SSU72Q9NP77 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SSU72Q9NP77 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.94□□□□□ -0.02
SSU72Q9NP77 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 HLA-V-204ENST00000476601 1289 ntBASIC14.94□□□□□ -0.02
SSU72Q9NP77 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.94□□□□□ -0.02
SSU72Q9NP77 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 MIR6080-201ENST00000617359 66 ntBASIC14.94□□□□□ -0.02
SSU72Q9NP77 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SSU72Q9NP77 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.94□□□□□ -0.02
SSU72Q9NP77 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 DGCR9-201ENST00000609630 2415 ntBASIC14.94□□□□□ -0.02
SSU72Q9NP77 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSU72Q9NP77 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SSU72Q9NP77 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSU72Q9NP77 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms