Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 TOMM22P5-201ENST00000416399 439 ntBASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 AC055876.3-201ENST00000431496 288 ntBASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 AL589739.1-201ENST00000607720 493 ntBASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 AC138649.4-201ENST00000612222 287 ntBASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 AC027612.1-201ENST00000445234 2395 ntBASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 MYO15B-237ENST00000642007 4893 ntBASIC15.54■□□□□ 0.08
LRRC4CQ9HCJ2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 AL354702.1-201ENST00000442006 1960 ntBASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 CNN2P2-201ENST00000443536 909 ntBASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 CNN2P3-201ENST00000450201 906 ntBASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 MEIS3P1-201ENST00000495167 958 ntBASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 CR383656.12-201ENST00000549567 513 ntBASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 AC015911.4-201ENST00000588022 1070 ntBASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 AL136317.3-201ENST00000618497 906 ntBASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC4CQ9HCJ2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC4CQ9HCJ2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms