Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 DBET-201ENST00000630918 3363 ntBASIC17.75■□□□□ 0.43
RNF41Q9H4P4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 YBX1P6-201ENST00000442962 1002 ntBASIC17.74■□□□□ 0.43
RNF41Q9H4P4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 AL391280.1-201ENST00000506969 1062 ntBASIC17.74■□□□□ 0.43
RNF41Q9H4P4 COX5BP1-201ENST00000507622 393 ntBASIC17.74■□□□□ 0.43
RNF41Q9H4P4 RN7SL713P-201ENST00000582127 302 ntBASIC17.74■□□□□ 0.43
RNF41Q9H4P4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 AC011270.2-201ENST00000624293 2550 ntBASIC17.74■□□□□ 0.43
RNF41Q9H4P4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF41Q9H4P4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 RN7SKP230-201ENST00000365642 335 ntBASIC17.73■□□□□ 0.43
RNF41Q9H4P4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 LINC01101-201ENST00000622953 1884 ntBASIC17.73■□□□□ 0.43
RNF41Q9H4P4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 AC013726.1-201ENST00000563747 2285 ntBASIC17.73■□□□□ 0.43
RNF41Q9H4P4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF41Q9H4P4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 AC011840.2-201ENST00000563063 1520 ntBASIC17.72■□□□□ 0.43
RNF41Q9H4P4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF41Q9H4P4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms