Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 AL049840.4-201ENST00000602422 811 ntBASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 AL391069.4-201ENST00000609583 481 ntBASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 INTS4P1-203ENST00000641008 3683 ntBASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 AC106881.1-201ENST00000605849 3329 ntBASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC68Q9H2F9 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC007787.1-201ENST00000588095 1583 ntBASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 MRPS18AP1-201ENST00000414458 589 ntBASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC093004.1-201ENST00000508850 424 ntBASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC023310.3-201ENST00000557027 670 ntBASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC100756.1-201ENST00000562736 682 ntBASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 RRP7BP-205ENST00000566851 833 ntBASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC138749.3-201ENST00000567691 622 ntBASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC116165.1-201ENST00000611806 668 ntBASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 AC009118.2-201ENST00000613275 655 ntBASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC68Q9H2F9 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC68Q9H2F9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC68Q9H2F9 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC68Q9H2F9 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC68Q9H2F9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 AC055876.2-201ENST00000531834 546 ntBASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 AC092053.3-201ENST00000641308 4975 ntBASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC68Q9H2F9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms