Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 DNAJB3-202ENST00000449667 1266 ntBASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 MEIS3P1-201ENST00000495167 958 ntBASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 AC044860.1-202ENST00000559481 777 ntBASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 AC004449.1-201ENST00000564240 433 ntBASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 AL596442.2-201ENST00000610240 980 ntBASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
POLR2J3Q9H1A7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J3Q9H1A7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J3Q9H1A7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J3Q9H1A7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
POLR2J3Q9H1A7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms