Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNU6-670P-201ENST00000364312 104 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 CXADRP1-201ENST00000398098 1095 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 HNRNPA1P68-201ENST00000425806 979 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 RPL7P56-201ENST00000429441 717 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 RAB28P3-201ENST00000448325 597 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 NDUFA5P7-201ENST00000452914 242 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC008280.2-201ENST00000455473 307 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC01322-203ENST00000496693 1075 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 PRPS1L1-201ENST00000506618 1090 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 MEF2C-AS1-203ENST00000508718 483 ntTSL 4 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 VN1R79P-201ENST00000593540 513 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC138649.3-201ENST00000622154 254 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 MSANTD2P1-201ENST00000445341 1368 ntBASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-3Q9BYR6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 UGT2B26P-201ENST00000508672 1613 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 CYP21A1P-202ENST00000354927 1481 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AK1-201ENST00000223836 736 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 RNU6-639P-201ENST00000384074 107 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AL049748.1-201ENST00000417782 601 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 PMS2P1-201ENST00000431037 1228 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 NR1I3-211ENST00000442691 1114 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC233982.1-201ENST00000451247 436 ntBASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms