Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.73■□□□□ 0.11
SMOQ99835 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.73■□□□□ 0.11
SMOQ99835 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
SMOQ99835 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.73■□□□□ 0.11
SMOQ99835 AC244157.2-201ENST00000616239 1006 ntBASIC15.73■□□□□ 0.11
SMOQ99835 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.73■□□□□ 0.11
SMOQ99835 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.73■□□□□ 0.11
SMOQ99835 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.73■□□□□ 0.11
SMOQ99835 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SMOQ99835 AC007292.2-201ENST00000593524 1812 ntBASIC15.73■□□□□ 0.11
SMOQ99835 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMOQ99835 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.73■□□□□ 0.11
SMOQ99835 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMOQ99835 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMOQ99835 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.72■□□□□ 0.11
SMOQ99835 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMOQ99835 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.72■□□□□ 0.11
SMOQ99835 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMOQ99835 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SMOQ99835 AC018529.2-202ENST00000611482 3087 ntBASIC15.72■□□□□ 0.11
SMOQ99835 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SMOQ99835 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
SMOQ99835 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMOQ99835 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMOQ99835 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMOQ99835 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.72■□□□□ 0.11
SMOQ99835 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMOQ99835 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.72■□□□□ 0.11
SMOQ99835 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SMOQ99835 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.72■□□□□ 0.11
SMOQ99835 BTBD6P1-201ENST00000412176 1267 ntBASIC15.72■□□□□ 0.11
SMOQ99835 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SMOQ99835 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMOQ99835 HSPB1P2-201ENST00000448722 546 ntBASIC15.72■□□□□ 0.11
SMOQ99835 AL591846.1-201ENST00000451736 433 ntBASIC15.72■□□□□ 0.11
SMOQ99835 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMOQ99835 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.72■□□□□ 0.11
SMOQ99835 GCOM2-201ENST00000509133 1104 ntBASIC15.72■□□□□ 0.11
SMOQ99835 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.72■□□□□ 0.11
SMOQ99835 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.72■□□□□ 0.11
SMOQ99835 RN7SL219P-201ENST00000582872 296 ntBASIC15.72■□□□□ 0.11
SMOQ99835 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SMOQ99835 AC091271.1-201ENST00000611877 1162 ntBASIC15.72■□□□□ 0.11
SMOQ99835 AL096828.3-201ENST00000615354 462 ntBASIC15.72■□□□□ 0.11
SMOQ99835 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.72■□□□□ 0.11
SMOQ99835 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.72■□□□□ 0.11
SMOQ99835 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.72■□□□□ 0.11
SMOQ99835 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SMOQ99835 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMOQ99835 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
SMOQ99835 TNRC18P2-201ENST00000417666 2714 ntBASIC15.72■□□□□ 0.11
SMOQ99835 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.71■□□□□ 0.11
SMOQ99835 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.71■□□□□ 0.11
SMOQ99835 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.71■□□□□ 0.11
SMOQ99835 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.71■□□□□ 0.11
SMOQ99835 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.71■□□□□ 0.11
SMOQ99835 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SMOQ99835 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.71■□□□□ 0.11
SMOQ99835 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.71■□□□□ 0.11
SMOQ99835 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.71■□□□□ 0.11
SMOQ99835 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.71■□□□□ 0.11
SMOQ99835 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
SMOQ99835 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.71■□□□□ 0.11
SMOQ99835 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.71■□□□□ 0.11
SMOQ99835 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.71■□□□□ 0.11
SMOQ99835 MIR4783-201ENST00000580343 82 ntBASIC15.71■□□□□ 0.11
SMOQ99835 AC005695.3-201ENST00000614522 232 ntBASIC15.71■□□□□ 0.11
SMOQ99835 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.71■□□□□ 0.11
SMOQ99835 AL136301.1-201ENST00000615830 422 ntBASIC15.71■□□□□ 0.11
SMOQ99835 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.71■□□□□ 0.11
SMOQ99835 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.71■□□□□ 0.11
SMOQ99835 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.71■□□□□ 0.11
SMOQ99835 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.71■□□□□ 0.11
SMOQ99835 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.71■□□□□ 0.11
SMOQ99835 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMOQ99835 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
SMOQ99835 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms