Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC19.31■□□□□ 0.68
ABCA3Q99758 IGHEP1-201ENST00000521393 651 ntBASIC19.31■□□□□ 0.68
ABCA3Q99758 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC19.31■□□□□ 0.68
ABCA3Q99758 FTLP5-201ENST00000586853 534 ntBASIC19.31■□□□□ 0.68
ABCA3Q99758 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA3Q99758 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
ABCA3Q99758 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ABCA3Q99758 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA3Q99758 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA3Q99758 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA3Q99758 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
ABCA3Q99758 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCA3Q99758 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCA3Q99758 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA3Q99758 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCA3Q99758 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ABCA3Q99758 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA3Q99758 AC022080.1-201ENST00000366255 781 ntBASIC19.31■□□□□ 0.68
ABCA3Q99758 AF274858.1-201ENST00000406288 372 ntBASIC19.31■□□□□ 0.68
ABCA3Q99758 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC19.31■□□□□ 0.68
ABCA3Q99758 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC19.31■□□□□ 0.68
ABCA3Q99758 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ABCA3Q99758 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCA3Q99758 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC19.31■□□□□ 0.68
ABCA3Q99758 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCA3Q99758 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA3Q99758 AC004686.1-201ENST00000605113 538 ntBASIC19.31■□□□□ 0.68
ABCA3Q99758 AC021016.3-201ENST00000608367 477 ntBASIC19.31■□□□□ 0.68
ABCA3Q99758 AP000769.1-203ENST00000637245 208 ntBASIC19.31■□□□□ 0.68
ABCA3Q99758 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA3Q99758 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.3■□□□□ 0.68
ABCA3Q99758 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCA3Q99758 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ABCA3Q99758 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ABCA3Q99758 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ABCA3Q99758 AC006504.5-208ENST00000588784 2401 ntBASIC19.3■□□□□ 0.68
ABCA3Q99758 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCA3Q99758 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ABCA3Q99758 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ABCA3Q99758 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC19.3■□□□□ 0.68
ABCA3Q99758 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ABCA3Q99758 SNORA57-201ENST00000383870 149 ntBASIC19.3■□□□□ 0.68
ABCA3Q99758 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ABCA3Q99758 RPS18P9-201ENST00000482817 460 ntBASIC19.3■□□□□ 0.68
ABCA3Q99758 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 CHCHD2P2-201ENST00000503744 321 ntBASIC19.3■□□□□ 0.68
ABCA3Q99758 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC19.3■□□□□ 0.68
ABCA3Q99758 CMC2-204ENST00000562713 573 ntTSL 3 BASIC19.3■□□□□ 0.68
ABCA3Q99758 CMC2-209ENST00000565108 399 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCA3Q99758 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCA3Q99758 RN7SL556P-201ENST00000582856 298 ntBASIC19.3■□□□□ 0.68
ABCA3Q99758 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.3■□□□□ 0.68
ABCA3Q99758 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCA3Q99758 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ABCA3Q99758 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC19.3■□□□□ 0.68
ABCA3Q99758 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
ABCA3Q99758 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ABCA3Q99758 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA3Q99758 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC19.29■□□□□ 0.68
ABCA3Q99758 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC19.29■□□□□ 0.68
ABCA3Q99758 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 RN7SL788P-201ENST00000460504 316 ntBASIC19.29■□□□□ 0.68
ABCA3Q99758 AC092896.1-201ENST00000465850 380 ntBASIC19.29■□□□□ 0.68
ABCA3Q99758 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ABCA3Q99758 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC19.29■□□□□ 0.68
ABCA3Q99758 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC19.29■□□□□ 0.68
ABCA3Q99758 AL160191.2-201ENST00000603975 601 ntBASIC19.29■□□□□ 0.68
ABCA3Q99758 AC020904.3-201ENST00000624199 442 ntBASIC19.29■□□□□ 0.68
ABCA3Q99758 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC19.29■□□□□ 0.68
ABCA3Q99758 AC020658.6-201ENST00000623564 1870 ntBASIC19.29■□□□□ 0.68
ABCA3Q99758 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
ABCA3Q99758 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 LAP3P2-201ENST00000454686 1454 ntBASIC19.29■□□□□ 0.68
ABCA3Q99758 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ABCA3Q99758 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ABCA3Q99758 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.29■□□□□ 0.68
ABCA3Q99758 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ABCA3Q99758 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ABCA3Q99758 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms