Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 NUS1P3-201ENST00000423502 862 ntBASIC10.96□□□□□ -0.65
C9orf85Q96MD7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 AL589987.1-201ENST00000453380 819 ntBASIC10.96□□□□□ -0.65
C9orf85Q96MD7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 FAM86LP-201ENST00000478302 853 ntBASIC10.96□□□□□ -0.65
C9orf85Q96MD7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 RARRES2P5-201ENST00000564013 466 ntBASIC10.96□□□□□ -0.65
C9orf85Q96MD7 AC009407.1-201ENST00000568958 598 ntBASIC10.96□□□□□ -0.65
C9orf85Q96MD7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 AL049840.4-201ENST00000602422 811 ntBASIC10.96□□□□□ -0.65
C9orf85Q96MD7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC10.96□□□□□ -0.65
C9orf85Q96MD7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
C9orf85Q96MD7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 AC117489.1-201ENST00000625169 3217 ntBASIC10.95□□□□□ -0.66
C9orf85Q96MD7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 SPDYE18-201ENST00000510091 1050 ntBASIC10.95□□□□□ -0.66
C9orf85Q96MD7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 AGGF1P1-201ENST00000509500 2073 ntBASIC10.95□□□□□ -0.66
C9orf85Q96MD7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 AL928921.2-201ENST00000641325 2442 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms