Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IFT43Q96FT9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.63■□□□□ 0.09
IFT43Q96FT9 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 BOLA2P3-201ENST00000404566 256 ntBASIC15.62■□□□□ 0.09
IFT43Q96FT9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 AL645728.2-202ENST00000641679 227 ntBASIC15.62■□□□□ 0.09
IFT43Q96FT9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.62■□□□□ 0.09
IFT43Q96FT9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.62■□□□□ 0.09
IFT43Q96FT9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IFT43Q96FT9 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 GHSR-202ENST00000427970 912 ntBASIC15.61■□□□□ 0.09
IFT43Q96FT9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
IFT43Q96FT9 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
IFT43Q96FT9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 254.1 ms