Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 SLC25A24P2-201ENST00000415059 510 ntBASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 AC004945.1-201ENST00000416738 983 ntBASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 HIST2H2BB-201ENST00000449108 381 ntBASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 AC126915.1-201ENST00000522847 1038 ntBASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 AC138466.3-201ENST00000619983 221 ntBASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 AC139749.1-202ENST00000617529 3139 ntBASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 AL359258.3-201ENST00000622910 2331 ntBASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 CHMP1AP1-201ENST00000445563 662 ntBASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 AC005077.2-201ENST00000449786 690 ntBASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 AC105250.1-201ENST00000509378 2057 ntBASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 AP001002.3-201ENST00000623482 206 ntBASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 AC104581.4-201ENST00000623126 3052 ntBASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.81■□□□□ 0.12
SHKBP1Q8TBC3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 AL157414.3-201ENST00000624276 1954 ntBASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms