Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 STK33P1-201ENST00000423835 1218 ntBASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 RPSAP36-202ENST00000494591 1261 ntBASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 MIR5572-201ENST00000583188 137 ntBASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 AL353726.2-201ENST00000623259 884 ntBASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX2-3Q8TAU0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 AC018442.1-201ENST00000421439 2061 ntBASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 FTLP1-201ENST00000449155 526 ntBASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 AC245884.6-201ENST00000515672 1067 ntBASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NKX2-3Q8TAU0 AL138725.1-201ENST00000407347 1314 ntBASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 MIR33B-201ENST00000385104 96 ntBASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 MIR769-201ENST00000390225 118 ntBASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 RN7SL720P-201ENST00000488178 304 ntBASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 MIR4783-201ENST00000580343 82 ntBASIC17.72■□□□□ 0.43
NKX2-3Q8TAU0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms