Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 AC020910.5-201ENST00000623668 1865 ntBASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AP000593.2-201ENST00000542775 1433 ntBASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC011840.2-201ENST00000563063 1520 ntBASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC026954.1-201ENST00000429771 1293 ntBASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC022210.1-201ENST00000449856 793 ntBASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 GPR53P-205ENST00000457298 1084 ntBASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC119751.2-201ENST00000504529 210 ntBASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC106820.3-201ENST00000561653 397 ntBASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 AL390755.1-201ENST00000623716 2027 ntBASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZIC4Q8N9L1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 FAM8A4P-201ENST00000435433 1213 ntBASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ZIC4Q8N9L1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms