Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PYY2-201ENST00000315776 282 ntBASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 AC108734.2-201ENST00000420887 1069 ntBASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 PPP1R2P4-201ENST00000424051 595 ntBASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 AC007950.2-201ENST00000615045 2347 ntBASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 AL591122.2-201ENST00000624125 1853 ntBASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 AL157792.1-201ENST00000488281 530 ntBASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 AC010234.1-201ENST00000494599 870 ntBASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 IGHV1-12-201ENST00000518307 205 ntBASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL27A1Q8IZC6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 KLF17P1-201ENST00000547105 1126 ntBASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms