Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 MIR1199-201ENST00000621445 119 ntBASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 DNM1P41-201ENST00000623634 3350 ntBASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.73□□□□□ -0.21
CROCCP3Q8IVE0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 POM121L14P-201ENST00000406100 1558 ntBASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AC011700.1-201ENST00000610409 2627 ntBASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AC073621.1-201ENST00000392730 636 ntBASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AC025062.2-201ENST00000605477 670 ntBASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 DLX4-206ENST00000611342 1662 ntBASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.72□□□□□ -0.21
CROCCP3Q8IVE0 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 MEX3B-202ENST00000558133 4333 ntBASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 CXCL1P1-201ENST00000502804 216 ntBASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 AC008608.2-201ENST00000606089 416 ntBASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms