Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 AC138028.6-201ENST00000616106 1482 ntBASIC16.78■□□□□ 0.28
TRIM50Q86XT4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM50Q86XT4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 AC005077.2-201ENST00000449786 690 ntBASIC16.77■□□□□ 0.28
TRIM50Q86XT4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 MIR4783-201ENST00000580343 82 ntBASIC16.77■□□□□ 0.28
TRIM50Q86XT4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM50Q86XT4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 LILRP1-201ENST00000444199 1370 ntBASIC16.77■□□□□ 0.27
TRIM50Q86XT4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM50Q86XT4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 RN7SKP230-201ENST00000365642 335 ntBASIC16.76■□□□□ 0.27
TRIM50Q86XT4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 AC002472.3-201ENST00000640124 621 ntBASIC16.76■□□□□ 0.27
TRIM50Q86XT4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM50Q86XT4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM50Q86XT4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM50Q86XT4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM50Q86XT4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM50Q86XT4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRIM50Q86XT4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM50Q86XT4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM50Q86XT4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM50Q86XT4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM50Q86XT4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM50Q86XT4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM50Q86XT4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms