Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 FKBP4P6-201ENST00000457486 1332 ntBASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 AL391280.1-201ENST00000506969 1062 ntBASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 COX5BP1-201ENST00000507622 393 ntBASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LRRTM4Q86VH4 TCAF2P1-201ENST00000291129 2421 ntBASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 CNN2P10-201ENST00000443067 918 ntBASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRTM4Q86VH4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRRTM4Q86VH4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 AC007969.1-201ENST00000433675 447 ntBASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 HOMER2P2-201ENST00000451621 847 ntBASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 AL583810.1-201ENST00000553344 1045 ntBASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 C2orf69P2-201ENST00000562032 1123 ntBASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 RN7SL713P-201ENST00000582127 302 ntBASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.77□□□□□ -0.05
LRRTM4Q86VH4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms