Protein–RNA interactions for Protein: Q7Z4N2

TRPM1, Transient receptor potential cation channel subfamily M member 1, humanhuman

Predictions only

Length 1,603 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1Q7Z4N2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 AC073150.1-201ENST00000450406 1084 ntBASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 AC003686.1-201ENST00000550956 1034 ntBASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRPM1Q7Z4N2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 MIR769-201ENST00000390225 118 ntBASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 SORD2P-201ENST00000558556 1069 ntBASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 RN7SL163P-201ENST00000583100 276 ntBASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 AGGF1P1-201ENST00000509500 2073 ntBASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC20.68■□□□□ 0.9
TRPM1Q7Z4N2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 ELK2AP-201ENST00000392510 1007 ntBASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 AC092580.1-201ENST00000433998 658 ntBASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 IMP3P2-201ENST00000489760 475 ntBASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 RN7SL190P-201ENST00000582519 257 ntBASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 AL161932.2-201ENST00000435436 679 ntBASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 PGAM1P5-201ENST00000548011 764 ntBASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 FGFR3P5-201ENST00000564496 886 ntBASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRPM1Q7Z4N2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM1Q7Z4N2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRPM1Q7Z4N2 AHCYP4-201ENST00000419201 1315 ntBASIC20.66■□□□□ 0.9
TRPM1Q7Z4N2 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.66■□□□□ 0.9
TRPM1Q7Z4N2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM1Q7Z4N2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM1Q7Z4N2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRPM1Q7Z4N2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM1Q7Z4N2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC20.66■□□□□ 0.9
TRPM1Q7Z4N2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
TRPM1Q7Z4N2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM1Q7Z4N2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms