Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 AP002803.1-201ENST00000528836 498 ntBASIC19.74■□□□□ 0.75
USP31Q70CQ4 AC135983.4-201ENST00000564116 1262 ntBASIC19.74■□□□□ 0.75
USP31Q70CQ4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.74■□□□□ 0.75
USP31Q70CQ4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.74■□□□□ 0.75
USP31Q70CQ4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC19.74■□□□□ 0.75
USP31Q70CQ4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
USP31Q70CQ4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC19.74■□□□□ 0.75
USP31Q70CQ4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
USP31Q70CQ4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP31Q70CQ4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 TMCO5B-205ENST00000530020 894 ntBASIC19.73■□□□□ 0.75
USP31Q70CQ4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 AC124068.2-201ENST00000569473 1109 ntBASIC19.73■□□□□ 0.75
USP31Q70CQ4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 MIR4750-201ENST00000584564 56 ntBASIC19.73■□□□□ 0.75
USP31Q70CQ4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 AC025262.2-201ENST00000623975 1056 ntBASIC19.73■□□□□ 0.75
USP31Q70CQ4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USP31Q70CQ4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP31Q70CQ4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 AC091951.1-201ENST00000512854 2465 ntBASIC19.72■□□□□ 0.75
USP31Q70CQ4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 AP000356.3-201ENST00000382243 753 ntBASIC19.72■□□□□ 0.75
USP31Q70CQ4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 CHCHD2P9-201ENST00000461726 456 ntBASIC19.72■□□□□ 0.75
USP31Q70CQ4 RN7SL8P-201ENST00000461771 266 ntBASIC19.72■□□□□ 0.75
USP31Q70CQ4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 MIR4649-201ENST00000582839 64 ntBASIC19.72■□□□□ 0.75
USP31Q70CQ4 AC084781.1-201ENST00000613737 656 ntBASIC19.72■□□□□ 0.75
USP31Q70CQ4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 CICP6-201ENST00000457191 2729 ntBASIC19.72■□□□□ 0.75
USP31Q70CQ4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
USP31Q70CQ4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP31Q70CQ4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
USP31Q70CQ4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP31Q70CQ4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP31Q70CQ4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP31Q70CQ4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms