Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TCAM1P-207ENST00000485295 1537 ntBASIC14.26□□□□□ -0.13
LPCAT4Q643R3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 AKR1C7P-201ENST00000305623 895 ntBASIC14.26□□□□□ -0.13
LPCAT4Q643R3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 TSPY19P-201ENST00000418461 509 ntBASIC14.26□□□□□ -0.13
LPCAT4Q643R3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 TSPY18P-201ENST00000441642 509 ntBASIC14.26□□□□□ -0.13
LPCAT4Q643R3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 AC091304.2-201ENST00000564639 760 ntBASIC14.26□□□□□ -0.13
LPCAT4Q643R3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LPCAT4Q643R3 DMBT1P1-203ENST00000636837 4628 ntBASIC14.26□□□□□ -0.13
LPCAT4Q643R3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 AC131212.3-201ENST00000624087 4219 ntBASIC14.25□□□□□ -0.13
LPCAT4Q643R3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LPCAT4Q643R3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LPCAT4Q643R3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms