Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.08□□□□□ -0.48
FAM78BQ5VT40 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 MTDHP5-201ENST00000598980 586 ntBASIC12.08□□□□□ -0.48
FAM78BQ5VT40 AC092902.6-201ENST00000641783 218 ntBASIC12.08□□□□□ -0.48
FAM78BQ5VT40 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 Z82170.1-201ENST00000625081 3192 ntBASIC12.08□□□□□ -0.48
FAM78BQ5VT40 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.08□□□□□ -0.48
FAM78BQ5VT40 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 YBX2P1-201ENST00000394192 760 ntBASIC12.07□□□□□ -0.48
FAM78BQ5VT40 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 AC004832.2-201ENST00000426397 482 ntBASIC12.07□□□□□ -0.48
FAM78BQ5VT40 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 SPDYE11-202ENST00000450699 704 ntBASIC12.07□□□□□ -0.48
FAM78BQ5VT40 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 SPDYE9P-201ENST00000570642 692 ntBASIC12.07□□□□□ -0.48
FAM78BQ5VT40 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 SPDYE10P-202ENST00000612005 668 ntBASIC12.07□□□□□ -0.48
FAM78BQ5VT40 SPDYE8P-202ENST00000612377 668 ntBASIC12.07□□□□□ -0.48
FAM78BQ5VT40 C20orf181-201ENST00000623918 480 ntBASIC12.07□□□□□ -0.48
FAM78BQ5VT40 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.07□□□□□ -0.48
FAM78BQ5VT40 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 PPT1-213ENST00000641319 2388 ntBASIC12.06□□□□□ -0.48
FAM78BQ5VT40 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms