Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 OR2K2-202ENST00000374428 1038 ntBASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 AC006122.1-201ENST00000493323 440 ntBASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM71Q2Q1W2 AC112693.3-201ENST00000624819 1983 ntBASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 AC144522.1-201ENST00000625111 1658 ntBASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 REXO1L2P-201ENST00000425429 2069 ntBASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 RN7SL181P-201ENST00000462921 277 ntBASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 AC026803.1-201ENST00000569130 274 ntBASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 SALL4P5-201ENST00000419001 1760 ntBASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM71Q2Q1W2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 AC087481.3-201ENST00000602886 1894 ntBASIC16.27■□□□□ 0.19
TRIM71Q2Q1W2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM71Q2Q1W2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms