Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 MIR648-201ENST00000385046 94 ntBASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 AC025181.2-201ENST00000606994 802 ntBASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 KRT8P14-201ENST00000414254 1442 ntBASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CTC1Q2NKJ3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 AC011477.6-201ENST00000604980 1927 ntBASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 AC114501.1-201ENST00000445949 172 ntBASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 AL391280.1-201ENST00000506969 1062 ntBASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 AC073352.2-201ENST00000609385 439 ntBASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CTC1Q2NKJ3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.08■□□□□ 0.17
CTC1Q2NKJ3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
CTC1Q2NKJ3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.08■□□□□ 0.17
CTC1Q2NKJ3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTC1Q2NKJ3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTC1Q2NKJ3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CTC1Q2NKJ3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CTC1Q2NKJ3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CTC1Q2NKJ3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CTC1Q2NKJ3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms