Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDH1Q08174 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDH1Q08174 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PCDH1Q08174 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 AC140479.7-201ENST00000636301 2332 ntBASIC14.57□□□□□ -0.08
PCDH1Q08174 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH1Q08174 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.57□□□□□ -0.08
PCDH1Q08174 TLE1P1-201ENST00000422965 589 ntBASIC14.57□□□□□ -0.08
PCDH1Q08174 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.57□□□□□ -0.08
PCDH1Q08174 WFDC1-204ENST00000613603 549 ntBASIC14.57□□□□□ -0.08
PCDH1Q08174 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH1Q08174 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH1Q08174 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PCDH1Q08174 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH1Q08174 LINC00552-201ENST00000625151 2579 ntBASIC14.57□□□□□ -0.08
PCDH1Q08174 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PCDH1Q08174 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PCDH1Q08174 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PCDH1Q08174 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDH1Q08174 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDH1Q08174 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH1Q08174 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDH1Q08174 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCDH1Q08174 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDH1Q08174 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PCDH1Q08174 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDH1Q08174 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PCDH1Q08174 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH1Q08174 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCDH1Q08174 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH1Q08174 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH1Q08174 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDH1Q08174 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDH1Q08174 AC120057.1-201ENST00000483947 663 ntBASIC14.56□□□□□ -0.08
PCDH1Q08174 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDH1Q08174 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PCDH1Q08174 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH1Q08174 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.56□□□□□ -0.08
PCDH1Q08174 AC009486.1-201ENST00000569860 813 ntBASIC14.56□□□□□ -0.08
PCDH1Q08174 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDH1Q08174 MIR3197-201ENST00000582241 73 ntBASIC14.56□□□□□ -0.08
PCDH1Q08174 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
PCDH1Q08174 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDH1Q08174 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDH1Q08174 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH1Q08174 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PCDH1Q08174 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.56□□□□□ -0.08
PCDH1Q08174 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDH1Q08174 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH1Q08174 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH1Q08174 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PCDH1Q08174 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
PCDH1Q08174 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH1Q08174 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH1Q08174 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH1Q08174 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH1Q08174 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH1Q08174 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH1Q08174 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms