Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL512343.1-201ENST00000605837 169 ntBASIC13.83□□□□□ -0.2
LTBQ06643 MIR6787-201ENST00000616675 61 ntBASIC13.83□□□□□ -0.2
LTBQ06643 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.83□□□□□ -0.2
LTBQ06643 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.83□□□□□ -0.2
LTBQ06643 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.83□□□□□ -0.2
LTBQ06643 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LTBQ06643 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.83□□□□□ -0.2
LTBQ06643 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.83□□□□□ -0.2
LTBQ06643 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 AL390755.1-201ENST00000623716 2027 ntBASIC13.83□□□□□ -0.2
LTBQ06643 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
LTBQ06643 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.83□□□□□ -0.2
LTBQ06643 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LTBQ06643 AC232323.1-201ENST00000540724 2099 ntBASIC13.83□□□□□ -0.2
LTBQ06643 REXO1L5P-201ENST00000622260 2098 ntBASIC13.83□□□□□ -0.2
LTBQ06643 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
LTBQ06643 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LTBQ06643 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.82□□□□□ -0.2
LTBQ06643 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LTBQ06643 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.82□□□□□ -0.2
LTBQ06643 AL157414.3-201ENST00000624276 1954 ntBASIC13.82□□□□□ -0.2
LTBQ06643 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LTBQ06643 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LTBQ06643 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 DFFBP1-201ENST00000433250 979 ntBASIC13.82□□□□□ -0.2
LTBQ06643 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.82□□□□□ -0.2
LTBQ06643 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.82□□□□□ -0.2
LTBQ06643 AC234783.1-201ENST00000441761 496 ntBASIC13.82□□□□□ -0.2
LTBQ06643 KRT223P-202ENST00000449164 1292 ntBASIC13.82□□□□□ -0.2
LTBQ06643 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 AC004066.1-201ENST00000502488 802 ntBASIC13.82□□□□□ -0.2
LTBQ06643 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.82□□□□□ -0.2
LTBQ06643 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 AC036164.1-201ENST00000570544 333 ntBASIC13.82□□□□□ -0.2
LTBQ06643 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 COX11-210ENST00000639671 696 ntBASIC13.82□□□□□ -0.2
LTBQ06643 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LTBQ06643 LINC00552-201ENST00000625151 2579 ntBASIC13.82□□□□□ -0.2
LTBQ06643 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.82□□□□□ -0.2
LTBQ06643 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LTBQ06643 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LTBQ06643 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.82□□□□□ -0.2
LTBQ06643 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.82□□□□□ -0.2
LTBQ06643 AL391825.1-201ENST00000457671 1364 ntBASIC13.82□□□□□ -0.2
LTBQ06643 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LTBQ06643 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.82□□□□□ -0.2
LTBQ06643 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms