Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SSBP1Q04837 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SSBP1Q04837 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.79□□□□□ -0.36
SSBP1Q04837 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP1Q04837 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SSBP1Q04837 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP1Q04837 AL121723.1-201ENST00000445194 1519 ntBASIC12.78□□□□□ -0.36
SSBP1Q04837 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSBP1Q04837 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SSBP1Q04837 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP1Q04837 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP1Q04837 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP1Q04837 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SSBP1Q04837 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSBP1Q04837 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP1Q04837 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP1Q04837 TOMM22P5-201ENST00000416399 439 ntBASIC12.78□□□□□ -0.36
SSBP1Q04837 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP1Q04837 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.78□□□□□ -0.36
SSBP1Q04837 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.78□□□□□ -0.36
SSBP1Q04837 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP1Q04837 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP1Q04837 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.78□□□□□ -0.36
SSBP1Q04837 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP1Q04837 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 RN7SL832P-201ENST00000607781 1756 ntBASIC12.78□□□□□ -0.36
SSBP1Q04837 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP1Q04837 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SSBP1Q04837 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP1Q04837 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.78□□□□□ -0.36
SSBP1Q04837 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSBP1Q04837 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SSBP1Q04837 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
SSBP1Q04837 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SSBP1Q04837 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.78□□□□□ -0.36
SSBP1Q04837 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.78□□□□□ -0.36
SSBP1Q04837 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.77□□□□□ -0.36
SSBP1Q04837 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP1Q04837 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP1Q04837 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP1Q04837 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP1Q04837 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SSBP1Q04837 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SSBP1Q04837 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.77□□□□□ -0.36
SSBP1Q04837 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.77□□□□□ -0.36
SSBP1Q04837 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP1Q04837 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.77□□□□□ -0.36
SSBP1Q04837 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
SSBP1Q04837 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP1Q04837 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP1Q04837 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SSBP1Q04837 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.77□□□□□ -0.37
SSBP1Q04837 ADH5P3-201ENST00000433842 1137 ntBASIC12.77□□□□□ -0.37
SSBP1Q04837 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.77□□□□□ -0.37
SSBP1Q04837 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.77□□□□□ -0.37
SSBP1Q04837 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SSBP1Q04837 BANF1P1-201ENST00000553684 263 ntBASIC12.77□□□□□ -0.37
SSBP1Q04837 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.77□□□□□ -0.37
SSBP1Q04837 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
SSBP1Q04837 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.77□□□□□ -0.37
SSBP1Q04837 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms