Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.11■□□□□ 0.17
CDR2Q01850 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDR2Q01850 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.11■□□□□ 0.17
CDR2Q01850 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.11■□□□□ 0.17
CDR2Q01850 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.11■□□□□ 0.17
CDR2Q01850 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDR2Q01850 AC236430.1-201ENST00000402231 743 ntBASIC16.11■□□□□ 0.17
CDR2Q01850 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CDR2Q01850 KLF2P2-201ENST00000416807 1039 ntBASIC16.11■□□□□ 0.17
CDR2Q01850 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.11■□□□□ 0.17
CDR2Q01850 AC002472.2-201ENST00000442739 958 ntBASIC16.11■□□□□ 0.17
CDR2Q01850 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDR2Q01850 AC022616.1-201ENST00000518688 554 ntBASIC16.11■□□□□ 0.17
CDR2Q01850 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CDR2Q01850 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.11■□□□□ 0.17
CDR2Q01850 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.11■□□□□ 0.17
CDR2Q01850 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.11■□□□□ 0.17
CDR2Q01850 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.11■□□□□ 0.17
CDR2Q01850 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.11■□□□□ 0.17
CDR2Q01850 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.11■□□□□ 0.17
CDR2Q01850 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.11■□□□□ 0.17
CDR2Q01850 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDR2Q01850 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDR2Q01850 INTS4P1-203ENST00000641008 3683 ntBASIC16.1■□□□□ 0.17
CDR2Q01850 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CDR2Q01850 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.1■□□□□ 0.17
CDR2Q01850 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.1■□□□□ 0.17
CDR2Q01850 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.1■□□□□ 0.17
CDR2Q01850 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.1■□□□□ 0.17
CDR2Q01850 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
CDR2Q01850 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDR2Q01850 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.1■□□□□ 0.17
CDR2Q01850 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.1■□□□□ 0.17
CDR2Q01850 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CDR2Q01850 ENPP7P5-201ENST00000541031 1031 ntBASIC16.1■□□□□ 0.17
CDR2Q01850 CTBP2P3-201ENST00000585629 1255 ntBASIC16.1■□□□□ 0.17
CDR2Q01850 AC008494.3-201ENST00000606615 944 ntBASIC16.1■□□□□ 0.17
CDR2Q01850 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.1■□□□□ 0.17
CDR2Q01850 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDR2Q01850 AP005019.2-201ENST00000615104 511 ntBASIC16.1■□□□□ 0.17
CDR2Q01850 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDR2Q01850 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CDR2Q01850 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CDR2Q01850 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CDR2Q01850 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
CDR2Q01850 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.1■□□□□ 0.17
CDR2Q01850 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDR2Q01850 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDR2Q01850 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.1■□□□□ 0.17
CDR2Q01850 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDR2Q01850 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.1■□□□□ 0.17
CDR2Q01850 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDR2Q01850 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDR2Q01850 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.09■□□□□ 0.17
CDR2Q01850 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDR2Q01850 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDR2Q01850 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.09■□□□□ 0.17
CDR2Q01850 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.09■□□□□ 0.17
CDR2Q01850 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDR2Q01850 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDR2Q01850 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.09■□□□□ 0.17
CDR2Q01850 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.09■□□□□ 0.17
CDR2Q01850 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDR2Q01850 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.09■□□□□ 0.17
CDR2Q01850 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDR2Q01850 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDR2Q01850 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.09■□□□□ 0.17
CDR2Q01850 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 331.3 ms