Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.88■□□□□ 0.29
ASIC1P78348 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ASIC1P78348 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ASIC1P78348 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.88■□□□□ 0.29
ASIC1P78348 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.88■□□□□ 0.29
ASIC1P78348 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ASIC1P78348 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ASIC1P78348 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.88■□□□□ 0.29
ASIC1P78348 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
ASIC1P78348 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.87■□□□□ 0.29
ASIC1P78348 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.87■□□□□ 0.29
ASIC1P78348 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ASIC1P78348 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.87■□□□□ 0.29
ASIC1P78348 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.87■□□□□ 0.29
ASIC1P78348 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ASIC1P78348 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.87■□□□□ 0.29
ASIC1P78348 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 KLF2P2-201ENST00000416807 1039 ntBASIC16.87■□□□□ 0.29
ASIC1P78348 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 TERF1P3-201ENST00000505638 1227 ntBASIC16.87■□□□□ 0.29
ASIC1P78348 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.87■□□□□ 0.29
ASIC1P78348 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ASIC1P78348 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.87■□□□□ 0.29
ASIC1P78348 WFDC1-204ENST00000613603 549 ntBASIC16.87■□□□□ 0.29
ASIC1P78348 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ASIC1P78348 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.87■□□□□ 0.29
ASIC1P78348 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 AC139749.1-202ENST00000617529 3139 ntBASIC16.87■□□□□ 0.29
ASIC1P78348 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ASIC1P78348 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ASIC1P78348 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.87■□□□□ 0.29
ASIC1P78348 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.86■□□□□ 0.29
ASIC1P78348 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
ASIC1P78348 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.86■□□□□ 0.29
ASIC1P78348 AL136379.1-201ENST00000623471 2642 ntBASIC16.86■□□□□ 0.29
ASIC1P78348 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ASIC1P78348 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.86■□□□□ 0.29
ASIC1P78348 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ASIC1P78348 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ASIC1P78348 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.86■□□□□ 0.29
ASIC1P78348 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
ASIC1P78348 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.86■□□□□ 0.29
ASIC1P78348 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.86■□□□□ 0.29
ASIC1P78348 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.86■□□□□ 0.29
ASIC1P78348 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.86■□□□□ 0.29
ASIC1P78348 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.86■□□□□ 0.29
ASIC1P78348 CU634019.7-201ENST00000624153 1185 ntBASIC16.86■□□□□ 0.29
ASIC1P78348 FP236241.2-201ENST00000624906 1185 ntBASIC16.86■□□□□ 0.29
ASIC1P78348 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.86■□□□□ 0.29
ASIC1P78348 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.86■□□□□ 0.29
ASIC1P78348 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.86■□□□□ 0.29
ASIC1P78348 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
ASIC1P78348 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ASIC1P78348 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.86■□□□□ 0.29
ASIC1P78348 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ASIC1P78348 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.85■□□□□ 0.29
ASIC1P78348 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.85■□□□□ 0.29
ASIC1P78348 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.85■□□□□ 0.29
ASIC1P78348 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.85■□□□□ 0.29
ASIC1P78348 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.85■□□□□ 0.29
ASIC1P78348 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.85■□□□□ 0.29
ASIC1P78348 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ASIC1P78348 AC005912.2-201ENST00000619492 2400 ntBASIC16.85■□□□□ 0.29
ASIC1P78348 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.85■□□□□ 0.29
ASIC1P78348 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms