Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.32□□□□□ -0.28
UBE2NP61088 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2NP61088 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2NP61088 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
UBE2NP61088 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.32□□□□□ -0.28
UBE2NP61088 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.32□□□□□ -0.28
UBE2NP61088 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
UBE2NP61088 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.32□□□□□ -0.28
UBE2NP61088 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2NP61088 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBE2NP61088 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 FAM45BP-202ENST00000592932 1624 ntBASIC13.31□□□□□ -0.28
UBE2NP61088 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2NP61088 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2NP61088 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2NP61088 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UBE2NP61088 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 OR8S1-201ENST00000310194 1080 ntBASIC13.31□□□□□ -0.28
UBE2NP61088 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.31□□□□□ -0.28
UBE2NP61088 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2NP61088 U91328.1-201ENST00000437528 223 ntBASIC13.31□□□□□ -0.28
UBE2NP61088 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.31□□□□□ -0.28
UBE2NP61088 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 AC017083.2-201ENST00000608069 979 ntBASIC13.31□□□□□ -0.28
UBE2NP61088 AC145423.3-201ENST00000615987 467 ntBASIC13.31□□□□□ -0.28
UBE2NP61088 AL603764.1-201ENST00000636452 321 ntBASIC13.31□□□□□ -0.28
UBE2NP61088 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 REXO1L5P-201ENST00000622260 2098 ntBASIC13.31□□□□□ -0.28
UBE2NP61088 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2NP61088 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 MROH4P-201ENST00000431302 1578 ntBASIC13.31□□□□□ -0.28
UBE2NP61088 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.31□□□□□ -0.28
UBE2NP61088 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
UBE2NP61088 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
UBE2NP61088 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UBE2NP61088 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UBE2NP61088 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2NP61088 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2NP61088 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2NP61088 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
UBE2NP61088 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2NP61088 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2NP61088 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.3□□□□□ -0.28
UBE2NP61088 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 AC112492.5-201ENST00000421897 457 ntBASIC13.3□□□□□ -0.28
UBE2NP61088 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2NP61088 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.3□□□□□ -0.28
UBE2NP61088 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.3□□□□□ -0.28
UBE2NP61088 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.3□□□□□ -0.28
UBE2NP61088 AC007551.1-201ENST00000457394 519 ntBASIC13.3□□□□□ -0.28
UBE2NP61088 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms