Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN12P56749 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 COL6A4P2-202ENST00000504443 2753 ntBASIC13.19□□□□□ -0.3
CLDN12P56749 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN12P56749 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CLDN12P56749 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLDN12P56749 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
CLDN12P56749 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN12P56749 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN12P56749 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN12P56749 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN12P56749 AL133267.1-201ENST00000398220 340 ntBASIC13.18□□□□□ -0.3
CLDN12P56749 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 MTND6P24-201ENST00000440466 518 ntBASIC13.18□□□□□ -0.3
CLDN12P56749 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN12P56749 TPT1P11-201ENST00000458482 498 ntBASIC13.18□□□□□ -0.3
CLDN12P56749 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN12P56749 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN12P56749 SLC25A1P1-201ENST00000528351 927 ntBASIC13.18□□□□□ -0.3
CLDN12P56749 ALG1L8P-201ENST00000533887 760 ntBASIC13.18□□□□□ -0.3
CLDN12P56749 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.18□□□□□ -0.3
CLDN12P56749 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN12P56749 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CLDN12P56749 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN12P56749 AL133215.2-201ENST00000609242 977 ntBASIC13.18□□□□□ -0.3
CLDN12P56749 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN12P56749 AC027601.4-201ENST00000611259 610 ntBASIC13.18□□□□□ -0.3
CLDN12P56749 AC018529.1-201ENST00000613063 361 ntBASIC13.18□□□□□ -0.3
CLDN12P56749 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CLDN12P56749 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLDN12P56749 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN12P56749 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 KRT8P12-202ENST00000472924 1397 ntBASIC13.18□□□□□ -0.3
CLDN12P56749 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CLDN12P56749 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN12P56749 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.18□□□□□ -0.3
CLDN12P56749 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLDN12P56749 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN12P56749 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN12P56749 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN12P56749 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN12P56749 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN12P56749 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CLDN12P56749 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN12P56749 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLDN12P56749 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms